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Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina
J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li; Han XZ(韩晓增)
2017
Source PublicationArchives of Microbiology
Volume199Issue:7Pages:1003-1009
AbstractA Gram-negative, non-spore-forming, aerobic rods, strain YIC4121(T) was isolated from root nodule of Sesbania cannabina grown in Dongying (Yellow River Delta), Shandong Province, PR China. Based on phylogenetic analysis of 16 S rRNA gene sequences, strain YIC4121(T) was assigned to the genus Agrobacterium with 99.7, 99.3, 99.0, 98.8 and 98.7% sequence similarities to Agrobacterium radiobacter LMG140(T), A. pusense NRCPB10(T), A. arsenijevicii KFB 330(T), A. nepotum 39/7(T) and A. larrymoorei ATCC51759(T). Analysis of the concatenated housekeeping genes (recA-atpD-glnII), showed lower sequence similarities (<= 94.6%) between strain YIC4121(T) and other recognized Agrobacterium species. Strain YIC4121(T) shared whole-genome average nucleotide identities (ANI) 87.94, 91.27 and 77.42%, with A. pusense NRCPB10(T), A. radiobacter LMG140(T) and A. larrymoorei ATCC51759(T). The predominant cellular fatty acids were C-19:0 cyclo omega 8c, summed feature 2 - (C-12:0 aldehyde/unknown 10.9525), summed feature 8 (C-18:1.omega c/ C-18:1 omega 6c), C-16:0 3 OH and C-16:0. The G + C content of strain - YIC4121(T) was 59.80 mol%. Tween 80, lactulose, citric acid, alpha-ketoglutaric acid, glycyl- L-glutamic acid and 2, 3butanediol could not be utilized as carbon source, distinguishing strain YIC4121(T) from the other related species. Based on the distinctly genetic and phenotypic dissimilarity, a novel species Agrobacterium deltaense sp. nov. is proposed with YIC4121(T) (= HAMBI 3654(T) = LMG 2928(T)) as the type strain.
DOI10.1007/s00203-017-1367-0
WOS IDWOS:000407367500006
Citation statistics
Cited Times:3[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.iga.ac.cn/handle/131322/7639
Collection湿地与全球变化学科组
Corresponding AuthorHan XZ(韩晓增)
Recommended Citation
GB/T 7714
J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li,Han XZ. Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina[J]. Archives of Microbiology,2017,199(7):1003-1009.
APA J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li,&韩晓增.(2017).Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina.Archives of Microbiology,199(7),1003-1009.
MLA J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li,et al."Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina".Archives of Microbiology 199.7(2017):1003-1009.
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